dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01313
Location and strand information: 24052 - 25848 (-)
Family: GH18|GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.03
Protein molecular weight: 63908.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01314
Location and strand information: 26058 - 30527 (-)
Family: null
Protein type: null
Protein description: DNA-directed RNA polymerase subunit beta'

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01315
Location and strand information: 30534 - 34031 (-)
Family: null
Protein type: null
Protein description: DNA-directed RNA polymerase subunit beta

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01316
Location and strand information: 34558 - 35664 (-)
Family: 3.A.1.5.34
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01317
Location and strand information: 35665 - 36768 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01318
Location and strand information: 36775 - 37809 (-)
Family: 3.A.1.5.38
Protein type: TC
Protein description: putative D,D-dipeptide transport system permease protein DdpC

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01319
Location and strand information: 37817 - 38833 (-)
Family: 3.A.1.5.39
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000001567_16|CGC2
Gene ID: MGYG000001567_01320
Location and strand information: 38953 - 40566 (-)
Family: 3.A.1.5.27
Protein type: TC
Protein description: Heme-binding protein A

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is chitin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001567_01313	hypothetical protein	CAZyme	24052	25848	-	GH18\| GH20
MGYG000001567_01314	DNA-directed RNA polymerase subunit beta'	null	26058	30527	-	RNA_pol_Rpb1_1\| RNA_pol_Rpb1_2\| RNA_pol_Rpb1_2\| RNA_pol_Rpb1_3\| RNA_pol_Rpb1_4\| RNA_pol_Rpb1_5\| RNA_pol_A_CTD
MGYG000001567_01315	DNA-directed RNA polymerase subunit beta	null	30534	34031	-	RNA_pol_Rpb2_1\| RNA_pol_Rpb2_2\| RNA_pol_Rpb2_3\| RNA_pol_Rpb2_45\| RNA_pol_Rpb2_6\| RNA_pol_Rpb2_7
MGYG000001567_01316	Oligopeptide transport ATP-binding protein OppF	TC	34558	35664	-	3.A.1.5.34
MGYG000001567_01317	Oligopeptide transport ATP-binding protein OppD	TC	35665	36768	-	3.A.1.5.20
MGYG000001567_01318	putative D,D-dipeptide transport system permease protein DdpC	TC	36775	37809	-	3.A.1.5.38
MGYG000001567_01319	Dipeptide transport system permease protein DppB	TC	37817	38833	-	3.A.1.5.39
MGYG000001567_01320	Heme-binding protein A	TC	38953	40566	-	3.A.1.5.27
Protein ID	Protein Name	Type	Start	End	Strand	Signature